YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7770342, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRTNPSSH TQQRPIYNST TVPRSNTTTN HPLSSLLRQL LQSQSPNHSG QLFGFLAFFI  60
   61 SGGILLLLTG ITVTAFVLGF IAFLPLIIIS SPIWIPLFLI VTGFLSLAGL ILATGAVVSW 120
  121 LYRYFKGMHP LRSDQVDYAR SRIHDTAAHV KDYAGGYFHG TLKDAAPGA

Type	Start	End	Confidence
Cytoplasmic	1	54	0.74
Transmembrane Helix	55	88	0.80
Non-Cytoplasmic	89	96	0.59
Transmembrane Helix	97	122	0.87
Cytoplasmic	123	169	0.92