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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SDP1L_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDISNEAGVD AFSIIGPTTI IGRTIAVRIL FCNSVSIFRH KVFRILKFFL RGGRVLLSPF  60
   61 VSLLHPRNPQ GILVMVTTMA FLLNRYTSLK AKAEMAYRRK FWRNMMRAAL TYEEWSHAAK 120
  121 MLDKETPKVN ETDLFDVELV SNKLDELKHR RHEGSLRDII FCMRADLVRN LGNMCNPELH 180
  181 KGRLHVPRLI KEYIDEVSTQ LRMVCDMDTE ELSLEEKLSF MHETRHAYGR TALLLSGGAS 240
  241 LGAFHLGVVK TLVEHKLLPR IIAGSSVGSV MCAVVGTRSW PELQSFFEGS WHALQFFDQM 300
  301 GGIFTTVKRV MTQGAVHEIR HLQWKLRNLT NNLTFQEAYD ITGRILGITV CSLRKHEPPR 360
  361 CLNYLTSPHV VIWSAVTASC AFPGLFEAQE LMAKDRTGEI VPYHPPFNLD PEEGSASVRR 420
  421 WRDGSLEMDL PMIQLKELFN VNHFIVSQAN PHIAPFLRMK EFVRACGGRF AAKLAQLAEM 480
  481 EVKHRCNQVL ELGLPLREVA SLFAQEWEGD VTIVMPATFS QYLKIIQNPS NVEIQKAANQ 540
  541 GRRCTWEKLA VIKANFGIEL ALDECVTVLN HMRRLKRSAE RAAAFSAISS SPPSKHLLAG 600
  601 TNRFNASKRI PSWNCIARQN SSGSVDDDVL AEASRLYQHI VVGSGRNSNR TSNLSHTYDA 660
  661 GSECDSPEAE DWTRSGGPLM RTNSAQMFTD YVQNLDAVDP EQIRASENDS IVAASSSSHS 720
  721 ITVTEGDYLQ TGRTHNGFVL NLVRGENLRM NSEPEDSQNE SEIPETPESV QLDSPEKDII 780
  781 DGESSASEDG DAQANLIHDH E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle