YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHI58_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTKIFLIL LLSLLGLYSE TVKSQNCDCA PNLCCSQFGY CGTTADYCGS TCQSGPCRVG  60
   61 GPPTGAGLVG NIVTQIFFNN IINQAGNGCA GKSFYTRDSF INATNTFPSF ANTVTRREIA 120
  121 TMFAHFTYET GHFCYIEEIN GASRVMCDQN NRQYPCAPAK SYHGRGPLLL SWNFNYGACG 180
  181 QSLGLDLLRQ PELVSSNPVV AFRTALWFWM KSVRPVLNQG FGATIRAISG FDCDGRNLGG 240
  241 VNARIGYYRD YCGQLGLDPG ANITC

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	265	0.99