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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB6G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP  60
   61 DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDPGAPSEGI FSSKTKTLLN GITGEARDGE 120
  121 ILAVLGASGS GKSTLIDALA NRIAKGSLKG NVTLNGEVLN SKMQKAISAY VMQDDLLFPM 180
  181 LTVEETLMFA AEFRLPRSLS KSKKSLRVQA LIDQLGLRNA ANTVIGDEGH RGISGGERRR 240
  241 VSIGIDIIHD PILLFLDEPT SGLDSTSALS VIKVLKRIAQ SGSMVIMTLH QPSYRLLRLL 300
  301 DRLLFLSRGQ TVFSGSPAML PRFFAEFGHP IPEHENRTEF ALDLIRELEG SAGGTRSLVE 360
  361 FNKGFRQRKA EPRSQTGLSL KEAISASISK GKLVSGATTT THSSGSSPVS TIPTFANPFW 420
  421 VELAVLAKRS MTNSRRQPEL FGIRLGAVLV TGFILATMFW QLDNSPKGVQ ERLGCFAFAM 480
  481 STTFYTCADA LPVFLQERFI FMRETAYNAY RRSSYVLSHS LVALPSLIIL SLAFAAITFW 540
  541 GVGLDGGLMG FLFYFLVILA SFWAGSSFVT FLSGVVPHVM LGYTIVVAIL AYFLLFSGFF 600
  601 INRDRIPGYW IWFHYISLVK YPYEAVLLNE FGDPTKCFVR GVQIFDNTPL VAVPQGMKVR 660
  661 LLATMSKSLG MRITSSTCLT TGYDILQQQG VTDLTKWNCL WVTVAWGFFF RILFYFSLLL 720
  721 GSKNKRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle