YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRR18_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSSSSVSKR FVLVPIVVVV TTQLLLVRNV SSLNLTNSYL HHKCVVNQGK YKPGSKYEKS  60
   61 LDDIIQSFSN KDKDSYGFRT GYSMKAYGKE PDMVSITYQC RIDSRGPKCQ SCVVTAGYEL 120
  121 LRKRCPRYKE AIIWYDQCLV EFSSLDTSGQ INYDDNFCMP SAKNLIGNSI SLEERLHLLN 180
  181 NLTKIAVTKI DKNIEGIKKP VLYAAGEKRL GTKSLYGMVQ CSADLSVQGC NECMLYYIVH 240
  241 FQECWENKQG VRVLSRSCNF RYELYPFINP KGPYYTKF

Type	Start	End	Confidence
Signal Peptide	1	32	0.62
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	278	0.99