YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TBL44_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLLPLLGI SVVSAIFFLV LQQPEQSSSA IILSLKKRHG SSSGSSGNQY SSSRPSAGFQ  60
   61 GNRSTCSLFL GTWVRDNSYP LYKPADCPGV VEPEFDCQMY GRPDSDYLKY RWQPQNCNLP 120
  121 TFNGAQFLLK MKGKTIMFAG DSLGKNQWES LICLIVSSAP STRTEMTRGL PLSTFRFLDY 180
  181 GITMSFYKAP FLVDIDAVQG KRVLKLDEIS GNANAWHDAD LLIFNTGHWW SHTGSMQGWD 240
  241 LIQSGNSYYQ DMDRFVAMEK ALRTWAYWVE THVDRSRTQV LFLSISPTHD NPSDWAASSS 300
  301 SGSKNCYGET EPITGTAYPV SSYTDQLRSV IVEVLHGMHN PAFLLDITLL SSLRKDGHPS 360
  361 VYSGLISGSQ RSRPDQSADC SHWCLPGLPD TWNQLLYTLL IY

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	402	0.99