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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCB1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATKLISPPL SCPWVTSREV IIKGLPRRRR EWMVTKRNRV SAVTAMIVEP LSVVSSSAIQ  60
   61 IHQWWEQNPN SLLLMTEATG GYSLASYYTS LGLFVISVPG LWSLIKRSVK SKIVRKTFVV 120
  121 NDVKKEPKQV AGEILSFFTR KNFNITDRGE TITFEGKMVP SRGQAALLTF CTCISLASVG 180
  181 LVLTITVPDF GNNWFFIILL SPLAGVYYWK KASRKEEIKV KMMVGSKGRL DEIVVQGDDV 240
  241 QVEEMRKELQ LNEKGMVYVK GLFERSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle