YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PDCB2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLVLYLLT LLMAGHTSAS WCVCKTGLSD SVLQKTLDYA CGNGADCNPT HPKGSCFNPD  60
   61 NVRAHCNYAV NSFFQKKGQA SESCNFTGTA TLTTTDPSYT GCAFPSSASG SSGSGSTTVT 120
  121 PGKNSPKGSN SITTFPGGNS PYSGTPSTGL LGGNITDATG TGLNPDYSTE SSGFALYYSN 180
  181 NLLLTGFCSL VMML

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	194	0.98