YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15239962, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLPPPLSM KSVALSGASS PSSSSNNDRK LSSAEQLILD LSNPELRENA LHELSKKREI  60
   61 FQDLAPLLWH SVGTIPALLQ EIIAVYPALS PPTMTPAQSN RVCNALALLQ CVASHTDTRM 120
  121 LFLKAHLPLY LYAFLNTSSK SRPFEYLRLT SLGVIGALVK VDDTEVIRFL LQTEIVPLCL 180
  181 RTMENGSELS KTVATFIVQK VLLDDVGLEY MCTTAERFFA LGRVLGNMVT SLAEGPSARL 240
  241 LKHIIRCYLR LTDNPRACDA LGSCLPDLLR DATFSGCLYD DPPAMQWLQQ LLHNVNVGGR 300
  301 APQGLAHMFV N

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	311	0.99