YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL76_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDNLERAKL MVSSTVFSWL LLCLFAVTTS VSVQPTCTFP AIYNFGDSNS DTGGISAAFE  60
   61 PIRDPYGQGF FHRPTGRDSD GRLTIDFIAE RLGLPYLSAY LNSLGSNFRH GANFATGGST 120
  121 IRRQNETIFQ YGISPFSLDM QIAQFDQFKA RSALLFTQIK SRYDREKLPR QEEFAKALYT 180
  181 FDIGQNDLSV GFRTMSVDQL KATIPDIVNH LASAVRNIYQ QGGRTFWVHN TGPFGCLPVN 240
  241 MFYMGTPAPG YLDKSGCVKA QNEMAMEFNR KLKETVINLR KELTQAAITY VDVYTAKYEM 300
  301 MSNPKKLGFA NPLKVCCGYH EKYDHIWCGN KGKVNNTEIY GGSCPNPVMA VSWDGVHYTE 360
  361 AANKHVADRT LNGLLTDPPV PITRACYRQ

Type	Start	End	Confidence
Signal Peptide	1	35	0.90
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	389	0.99