YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17065530, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF  60
   61 FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF SGFWPTLAVF AQKIPVLGWI 120
  121 IQQPYIRSFF DKYRGKRVPV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.96
Transmembrane Helix	12	31	0.96
Non-Cytoplasmic	32	36	0.79
Transmembrane Helix	37	58	0.88
Cytoplasmic	59	68	0.84
Transmembrane Helix	69	88	0.93
Non-Cytoplasmic	89	95	0.71
Transmembrane Helix	96	121	0.74
Cytoplasmic	122	140	0.90