YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OP164_ARATH
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEELLSAVP CSSLTVESVL RVATAGGLYG LCAGPRDARK IGLSGVSQAS FVAKSIGRFG  60
   61 FQCGLVSGVF TMTHCGLQRY RGKNDWVNAL VGGAVAGAAV AISTRNWTQV VGMAGLVSAF 120
  121 SVLANCTRTE NPNNTN

Type	Start	End	Confidence
Cytoplasmic	1	85	0.54
Transmembrane Helix	86	104	0.81
Non-Cytoplasmic	105	109	0.58
Transmembrane Helix	110	127	0.48
Cytoplasmic	128	136	0.55