YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP21A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRREISFLLQ PRCLLLLVAL TIFLVFALFN TGKDEEKQVI EDHEITNRVF LDVDIDGQRL  60
   61 GRIVIGLYGT VVPKTVENFR ALCTGEKGKT SSGKPLHYKG TPFHRIISGF VIQGGDIIHG 120
  121 DGKSSDSIYG GTFPDENFKI QHSHAGMVAM ANTGPDSNGS QFFITTVKAS WLEGEHVVLG 180
  181 KVIQGMDNVF AIEGGAGTYS GKPRKKVVIA DSGEIPKDKW DEER

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	224	0.99