YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110736294, gi...
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKSSSMAVA EKISWYCAVF AAMMLLMNSF QVAQEGSTEI VEKQQPSMMI TGYSHRRPAC  60
   61 DEIYEVKEGE TLQTISEKCG DPYIVEGNPH IHDHDDLFPG LLIRITPSL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.53
Transmembrane Helix	13	32	0.56
Non-Cytoplasmic	33	109	0.95