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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAO4B_ARATH
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDVRRRNRG HPLLRSKKRG EGYNHGFSPS QIQSLAVICQ TFLPPETTSE QQAVNSFHVA  60
   61 SSTQPPFTDE VAEMIVKNGR SEAVKVLRII LMILSFRFGT LLLCGSLCLD KSWPFVLKFS 120
  121 QLPLDKREAI LRNWSRQSGF LLPFRITFFL AKFYTLFYFF SQTDENLKNP ALEAIGYCID 180
  181 GTERSSNKKS EADEKRRPLE KGIIETMHES DVTITQSLTE KGVHVARDDG DNVYRIRCDA 240
  241 VVVGSGSGGG VAAANLAKAG LKVLVLEKGN YFTAHDYSGL EVPSMLELYE KGGLLTTVDG 300
  301 KFMLLAGSAV GGGTAVNWSA SIRTPDHVLQ EWSEGSKIKF FGSQEYQSAM DEVTIRIGVT 360
  361 ERCVKHGFQN QVLRKGCERL GLQVESVPRN SPEDHYCGLC GYGCRAGAKN GTDQTWLVDA 420
  421 VENGAVILTG IKAERFVLVD NTSSSNERKK RCVGVFASSV GGKIGKKFII EARVTVSSAG 480
  481 SLLTPPLMLS SGLKNPNIGR NLKLHPVLMT WGYFPEKDSE FSGKMYEGGI ITSVHHMNDT 540
  541 ESGCKAILEN PLIGPASYAG LSPWVSGPDL KERMIKYGRT AHLFALVRDL GSGEVMMENE 600
  601 VTYRTTKKDR ENLRAGLRQA LRVSVAAGAV EVGTYRSDGQ KMKCEAITKE AMEEFLDEVD 660
  661 AVGGVGTKGE YWTTYFSAHQ MGSCRMGVTA EEGALDENGE SWEAEGLFVC DGSILPSAVG 720
  721 VNPMITIQST AYCISSKIVD SLQNKTKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle