YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1657615, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARLLFRRS SQILRSIQRN PQISSSFESP PCPIFHSLTT ASPDPSRLSS LTFLRSLSIA  60
   61 RRGPTRPKKI DIGAKARQMQ NRRLWTYALT FSCIAGFVVI VLNQFQDQLV FYLTPSDAME 120
  121 KFAENPTKNK FRLGGLVLEG SVAQPAASQE MEFVITDLIT DILVRYKGSL PDLFREGHSV 180
  181 VVEGFIKPYT DEVRKEVSTK PISKKARNLD CFFSATEVLA KHDEKYMPQE VAAAIEKNKK 240
  241 IIEAAATEQA AEVAAS

Type	Start	End	Confidence
Cytoplasmic	1	83	0.97
Transmembrane Helix	84	103	0.95
Non-Cytoplasmic	104	256	0.99