YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLPP5_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHACVSTSA SSLRFTAGFV SASPNGSSFD SPKLSLPFEP LRSRKTNKLV SDRKNWKNST  60
   61 PKAVYSGNLW TPEIPSPQGV WSIRDDLQVP SSPYFPAYAQ GQGPPPMVQE RFQSIISQLF 120
  121 QYRIIRCGGA VDDDMANIIV AQLLYLDAVD PTKDIVMYVN SPGGSVTAGM AIFDTMRHIR 180
  181 PDVSTVCVGL AASMGAFLLS AGTKGKRYSL PNSRIMIHQP LGGAQGGQTD IDIQANEMLH 240
  241 HKANLNGYLA YHTGQSLEKI NQDTDRDFFM SAKEAKEYGL IDGVIMNPLK ALQPLAAA

Type	Start	End	Confidence
Signal Peptide	1	22	0.81
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	298	0.90