YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APY2_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAKRGIGRH ESLADKIQRH RGIILVISVP IVLIGLVLLL MPGRSISDSV VEEYSVHNRK  60
   61 GGPNSRGPKN YAVIFDAGSS GSRVHVYCFD QNLDLIPLGN ELELFLQLKP GLSAYPTDPR 120
  121 QAANSLVSLL DKAEASVPRE LRPKTHVRVG ATAGLRTLGH DASENILQAV RELLRDRSML 180
  181 KTEANAVTVL DGTQEGSYQW VTINYLLRNL GKPYSDTVGV VDLGGGSVQM AYAISEEDAA 240
  241 SAPKPLEGED SYVREMYLKG RKYFLYVHSY LHYGLLAARA EILKVSEDSE NPCIVAGYDG 300
  301 MYKYGGKEFK APASQSGASL DECRRITINA LKVNDTLCTH MKCTFGGVWN GGRGGGQKNM 360
  361 FVASFFFDRA AEAGFVDPKQ PVATVRPMDF EKAAKKACSM KLEEGKSTFP LVEEENLPYL 420
  421 CMDLVYQYTL LIDGFGLEPS QTITLVKKVK YGDQAVEAAW PLGSAIEAVS SP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle