YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7268994, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKIEHTTIS TNGINMHVAS IGSGPVILFV HGFPDLWYSW RHQLVSFAAL GYRAIAPDLR  60
   61 GYGDSDAPPS RESYTILHIV GDLVGLLDSL GVDRVFLVGH DWGAIVAWWL CMIRPDRVNA 120
  121 LVNTSVVFNP RNPSVKPVDA FRALFGDDYY ICRFQEPGEI EEDFAQVDTK KLITRFFTSR 180
  181 NPRPPCIPKS VGFRGLPDPP SLPAWLTEQD VRFYGDKFSQ KGFTGGLNYY RALNLSWELT 240
  241 APWTGLQIKV PVKFIVGDLD ITYNIPGTKE YIHEGGLKKH VPFLQEVVVM EGVGHFLHQE 300
  301 KPDEVTDHIY GFFKKFRTRE TASL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.73
Transmembrane Helix	13	33	0.76
Non-Cytoplasmic	34	324	0.63