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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MPK20_ARATH
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQDNRKKNN LEMEFFSDYG DANRFKVQEV IGKGSYGVVC SAIDTLTGEK VAIKKIHDIF  60
   61 EHISDAARIL REIKLLRLLR HPDIVEIKHI MLPPSRREFK DIYVVFELME SDLHQVIKAN 120
  121 DDLTREHYQF FLYQLLRALK YIHTANVYHR DLKPKNILAN ANCKLKICDF GLARVAFNDT 180
  181 PTTIFWTDYV ATRWYRAPEL CGSFYSKYTP AIDIWSIGCI FAEVLMGKPL FPGKNVVHQL 240
  241 DLMTDLLGTP SLDTISRVRN EKARRYLTSM RKKPPIPFAQ KFPNADPLSL KLLERLLAFD 300
  301 PKDRPTAEEA LADPYFKGLA KVEREPSCQP ITKMEFEFER RKVTKEDIRE LISREILEYH 360
  361 PQLLKDHMNG ADKASFLYPS AVDQFRRQFA HLEENSGKTG PVAPLERKHA SLPRSTVIHS 420
  421 TAVARGGQPK LMNNTNTLNP ETTQNIPFNH ATIQAQQRNL SAAKPSTFMG PVAPFDNGRI 480
  481 SRDAYDPRSF IRSTNLPFSQ QSAATVAMGK QQERRTTMEP EKQARQISQY NRYAPDVAIN 540
  541 IDNNPFIMAR TGMNKAENIS DRIIIDTNLL QATAGIGVAA AAAAAAPGGS AHRKVGAVRY 600
  601 GMSKMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle