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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT44_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGTTFIFL FSSLLVLSLS SVSADKDDHG DQQVYIVYLG SLPSREEYTP MSDHMSILQE  60
   61 ITGESLIENR LVRSYKKSFN GFAARLTESE RKRLAGMERV VSVFPSRKLK LQTTSSWNFM 120
  121 GLKEGIKTKR TRSIESDTII GVIDSGIYPE SDSFSDQGFG PPPKKWKGTC AGGKNFTCNN 180
  181 KVIGARDYTA KSKANQTARD YSGHGTHTAS IAAGNAVANS NFYGLGNGTA RGGVPAARIA 240
  241 VYKVCDNEGC DGEAMMSAFD DAIADGVDVI SISIVLDNIP PFEEDPIAIG AFHAMAVGVL 300
  301 TVNAAGNNGP KISTVTSTAP WVFSVAASVT NRAFMAKVVL GDGKILIGRS VNTYDMNGTN 360
  361 YPLVYGKSAA LSTCSVDKAR LCEPKCLDGK LVKGKIVLCD STKGLIEAQK LGAVGSIVKN 420
  421 PEPDRAFIRS FPVSFLSNDD YKSLVSYMNS TKNPKATVLK SEEISNQRAP LVASFSSRGP 480
  481 SSIVSDILKP DITAPGVEIL AAYSPDSSPT ESEFDTRRVK YSVLSGTSMA CPHVAGVAAY 540
  541 VKTFHPQWSP SMIQSAIMTT AWPMNASGSG FVSTEFAYGS GHVDPIDAIN PGLVYELTKA 600
  601 DHINFLCGLN YTSDHLRIIS GDNSTCTKEI SKTLPRNLNY PTMSAKVSGT KPFNITFQRT 660
  661 VTNVGMQKST YNAKVVKFPG SKLSIKVSPR VLSMKSMNEK QSFMVTVSSD SIGTKQPVSA 720
  721 NLIWSDGTHN VRSPIIVYAM S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle