YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23308197, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESINTLKGY DKVSDQENQI HHHHHSPLPK PSSFSRKTLI ATGSVVSLLL ILSVVALTAG  60
   61 AFTHSPPHHP PISSASLKSL CSVTRYPETC FNSLSSSLNE SDSKLNPESI LELSLRVAAK 120
  121 EISNLSISFR SINDMPEDAA VGDCVKLYTD ALSQLNDSIT EIERKKKKGG NNWLTEEVVG 180
  181 DVKTWISAAM TDGETCSDGI EEMGTIVGNE IKKKMEMANQ MMSISLAIVS QMKKLLLIFH 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	38	0.97
Transmembrane Helix	39	62	0.91
Non-Cytoplasmic	63	240	0.97