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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT17_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSFLSSTA FFLLLCLGFC HVSSSSSDQG TYIVHMAKSQ MPSSFDLHSN WYDSSLRSIS  60
   61 DSAELLYTYE NAIHGFSTRL TQEEADSLMT QPGVISVLPE HRYELHTTRT PLFLGLDEHT 120
  121 ADLFPEAGSY SDVVVGVLDT GVWPESKSYS DEGFGPIPSS WKGGCEAGTN FTASLCNRKL 180
  181 IGARFFARGY ESTMGPIDES KESRSPRDDD GHGTHTSSTA AGSVVEGASL LGYASGTARG 240
  241 MAPRARVAVY KVCWLGGCFS SDILAAIDKA IADNVNVLSM SLGGGMSDYY RDGVAIGAFA 300
  301 AMERGILVSC SAGNAGPSSS SLSNVAPWIT TVGAGTLDRD FPALAILGNG KNFTGVSLFK 360
  361 GEALPDKLLP FIYAGNASNA TNGNLCMTGT LIPEKVKGKI VMCDRGINAR VQKGDVVKAA 420
  421 GGVGMILANT AANGEELVAD AHLLPATTVG EKAGDIIRHY VTTDPNPTAS ISILGTVVGV 480
  481 KPSPVVAAFS SRGPNSITPN ILKPDLIAPG VNILAAWTGA AGPTGLASDS RRVEFNIISG 540
  541 TSMSCPHVSG LAALLKSVHP EWSPAAIRSA LMTTAYKTYK DGKPLLDIAT GKPSTPFDHG 600
  601 AGHVSPTTAT NPGLIYDLTT EDYLGFLCAL NYTSPQIRSV SRRNYTCDPS KSYSVADLNY 660
  661 PSFAVNVDGV GAYKYTRTVT SVGGAGTYSV KVTSETTGVK ISVEPAVLNF KEANEKKSYT 720
  721 VTFTVDSSKP SGSNSFGSIE WSDGKHVVGS PVAISWT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle