YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23296675, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSLLLSLT LTFLFAGIVS ARDWNILSQL KGTTTTTKTS QTGVTSLKAP NLNGYCESWR  60
   61 VNVELNNIRD FKVVPQECVW FVQKYMTSSQ YEDDVERAVD EAILYLGKTC CEKKTCDGMD 120
  121 AWIFDIDDTL LSTIPYHKSN GCFGGEQLNT TKFEEWQNSG KAPAVPHMVK LYHEIRERGF 180
  181 KIFLISSRKE YLRSATVENL IEAGYHSWSN LLLRGEDDEK KSVSQYKADL RTWLTSLGYR 240
  241 VWGVMGAQWN SFSGCPVPKR TFKLPNSIYY VA

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	272	0.99