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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SCP38_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKQQDWSVT ACIFLSLSLA SQIHCSSQTH FPSHKGGAGL SGDTSHFNSV SRENVLSLKE  60
   61 KDLIEKLPGQ PSGISFRQYG GYVAVNEPAT RFLYYYFVEA IKPSKSTPLV LWFNGGPGCS 120
  121 SVGFGAFEEL GPFRVHSDGK TLYRNPYSWN NEANMLFFEG PISVGFSYSS TPFDWEIFGE 180
  181 QADKLTAEDN YMFLVNWLER FPEYKGRDVY ISGQSYAGHY IPQLAQIILH RNNQTFINLR 240
  241 GISIGNPGLD LLIEADNENK FILSHGLVSQ KDFEEYSKVC DFANYDMDEC PKIMPKFSIE 300
  301 HNKHLDVYNI YAPVCLNSTL SSEPKKCTTI MEVDPCRSNY VKAYLNSENV QEAMHANTTK 360
  361 LPYEWKACNH YLNSVWIDAD KDASMVPILH DLMGEGVRVL VYSGDVDAAI PFTATMAVLK 420
  421 TMNLTVVNEW RPWFTGGQLG GFTEDYERNL TYATVKGSGH SVPLDQPVHA LNLFTSFIRN 480
  481 TPLPQTP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle