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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17529298, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSWFLVEK ARRCLRTVFF MVAMLASLLV SSLPLLVAIG DVLVPSFLLS SFTCVTCYGA  60
   61 KEHLRRYGFK RSLTDIPIVS VVRSFLVICI YLLSDVPALS HGPYLGTVSL CSVVSVLLLS 120
  121 VKACLFTVNS QLNNEASFSP SRKRLHLKKS WGMPVLFLSS VVFALGHTVV AYRTSCRARR 180
  181 KILYHRVDPE AVLSCKSIFS GHQKVPRSPT PVVGKASKFD GEARRKPLSH DEGELPVRLL 240
  241 ADVDSLFVTI RGLTVHYKLC SPGSPRQSIS SNVLEANSSY NTPEIMAGRS KFDRKVLSMV 300
  301 TKSQHHHHHR SYNSLFNNSS LHDPLLDGSP TSPLLFKEIK EGTGLVDDMN VFNFGAEEQD 360
  361 LGESGQFGVV LVHGFGGGVF SWRHVMGSLA QQLGCVVTAF DRPGWGLTAR PHKNDLEERQ 420
  421 LLNPYSLENQ VEMLIAFCYE MGFSSVVFVG HDDGGLLALK AAQRLMATND PIKVVVKGVV 480
  481 LLNTSLSREV VPAFARILLH TSLGKKHLVR PLLRTEIAQV VNRRAWYDPA KMTTDVLRLY 540
  541 KAPLHVEGWD EALHEIGRLS SEMVLAPQNA ASLLKAVENL PVLVIAGAED ALVPLKSSQG 600
  601 MASKLLNSRL VAISGCGHLP HEECPKALLA AMSPFITRLV IRPDLQSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle