YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DOT1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANHKNLFFL CFLIGLGLCS ARRALLSSSE SEAEVAAYGV NSGLSAGLGV GIGGGPGGGS  60
   61 GYGGGSGEGG GAGGHGEGHI GGGGGGGHGG GAGGGGGGGP GGGYGGGSGE GGGAGYGGGE 120
  121 AGGHGGGGGG GAGGGGGGGG GAHGGGYGGG QGAGAGGGYG GGGAGGHGGG GGGGNGGGGG 180
  181 GGSGEGGAHG GGYGAGGGAG EGYGGGAGAG GHGGGGGGGG GSGGGGGGGG GYAAASGYGH 240
  241 GGGAGGGEGS GGYVP

Type	Start	End	Confidence
Signal Peptide	1	21	0.82
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	255	0.80