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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12325149, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALDSSVALS PRRRHGLLRD QVQLIKRKDS GRYEIVPIED PLSFEKGFYA VIRACQLLAQ  60
   61 KNDGLILVGL AGPSGAGKTI FTEKILNFMP SIAIINMDNY NDGTRVIDGN FDDPRLTDYD 120
  121 TLLDNIHGLR DGKPVQVPIY DFKSSSRIGY RTLEVPSSRI VILEGIYALS EKLRPLLDLR 180
  181 VSVTGGVHFD LVKRVLRDIQ RAGQEPEEII HQISETVYPM YKAFIEPDLK TAQIKILNKF 240
  241 NPFSGFQNPT YILKSSKAVT PEQMKAALSE DFKERTEETY DIYLLPPGED PEACQSYLRM 300
  301 RNRDGKYNLM FEEWVTDRPF IISPRITFEV SVRLLGGLMA LGYTIATILK RKSHIFDDDK 360
  361 VIVKTDWLEQ LNRTYVQVQG KDRTFVKNVA DQLGLEGSYV PHTYIEQIQL ERLVNDVLAL 420
  421 PDDLKTKLSL DDDTVSSPKE ALSRASVDSR MKYLHGGVSK SYTNPRHKVL PNLTRLAVNN 480
  481 RMLDARAPAS PATLPNQGFI TQLSDQISTL NERMDEFTSR IEELNSKIPN RIAPSGSQHN 540
  541 LALPIENGNG SVLSFSASAS QLVRESPLME EVVLVARGQR QIMHQMDTLS NLLREYVGEK 600
  601 TRIERLDSSR TNSTTQNLES STVPILLGLA IGCVGIFAYS RLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle