YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LRK62_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTQRSMFIV SFLFKLFLFL SVHVRAQRTT TNFAFRGFNG NQSKIRIEGA AMIKPDGLLR  60
   61 LTDRKSNVTG TAFYHKPVRL LNRNSTNVTI RSFSTSFVFV IIPSSSSNKG FGFTFTLSPT 120
  121 PYRLNAGSAQ YLGVFNKENN GDPRNHVFAV EFDTVQGSRD DNTDRIGNDI GLNYNSRTSD 180
  181 LQEPVVYYNN DDHNKKEDFQ LESGNPIQAL LEYDGATQML NVTVYPARLG FKPTKPLISQ 240
  241 HVPKLLEIVQ EEMYVGFTAS TGKGQSSAHY VMGWSFSSGG ERPIADVLIL SELPPPPPNK 300
  301 AKKEGLNSQV IVMIVALSAV MLVMLVLLFF FVMYKKRLGQ EETLEDWEID HPRRLRYRDL 360
  361 YVATDGFKKT GIIGTGGFGT VFKGKLPNSD PIAVKKIIPS SRQGVREFVA EIESLGKLRH 420
  421 KNLVNLQGWC KHKNDLLLIY DYIPNGSLDS LLYTVPRRSG AVLSWNARFQ IAKGIASGLL 480
  481 YLHEEWEKIV IHRDVKPSNV LIDSKMNPRL GDFGLARLYE RGTLSETTAL VGTIGYMAPE 540
  541 LSRNGNPSSA SDVFAFGVLL LEIVCGRKPT DSGTFFLVDW VMELHANGEI LSAIDPRLGS 600
  601 GYDGGEARLA LAVGLLCCHQ KPASRPSMRI VLRYLNGEEN VPEIDDEWGY SKSSRSEFGS 660
  661 KLVGYVSSTS ITRVSSTSRI SQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle