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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UGDH1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKICCIGAG YVGGPTMAVM ALKCPEIEVV VVDISEPRIN AWNSDRLPIY EPGLEDVVKQ  60
   61 CRGKNLFFST DVEKHVFESD IVFVSVNTPT KTQGLGAGKA ADLTYWESAA RMIADVSKSS 120
  121 KIVVEKSTVP VRTAEAIEKI LTHNSKGIEF QILSNPEFLA EGTAIKDLYN PDRVLIGGRD 180
  181 TAAGQKAIKA LRDVYAHWVP VEQIICTNLW SAELSKLAAN AFLAQRISSV NAMSALCEAT 240
  241 GADVTQVAHA VGTDTRIGPK FLNASVGFGG SCFQKDILNL IYICECNGLP EAANYWKQVV 300
  301 KVNDYQKIRF ANRVVSSMFN TVSGKKIAIL GFAFKKDTGD TRETPAIDVC NRLVADKAKL 360
  361 SIYDPQVLEE QIRRDLSMAR FDWDHPVPLQ QIKAEGISEQ VNVVSDAYEA TKDAHGLCVL 420
  421 TEWDEFKSLD FKKIFDNMQK PAFVFDGRNV VDAVKLREIG FIVYSIGKPL DSWLKDMPAV 480
  481 A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle