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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSL10_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQKSSNGG GGGGDVVINV PVEEASRRSK EMASPESEKG VPFSKSPSPE ISKLVGSPNK  60
   61 PPRAPNQNNV GLTQRKSFAR SVYSKPKSRF VDPSCPVDTS ILEEEVREQL GAGFSFSRAS 120
  121 PNNKSNRSVG SPAPVTPSKV VVEKDEDEEI YKKVKLNREM RSKISTLALI ESAFFVVILS 180
  181 ALVASLTINV LKHHTFWGLE VWKWCVLVMV IFSGMLVTNW FMRLIVFLIE TNFLLRRKVL 240
  241 YFVHGLKKSV QVFIWLCLIL VAWILLFNHD VKRSPAATKV LKCITRTLIS ILTGAFFWLV 300
  301 KTLLLKILAA NFNVNNFFDR IQDSVFHQYV LQTLSGLPLM EEAERVGREP STGHLSFATV 360
  361 VKKGTVKEKK VIDMGKVHKM KREKVSAWTM RVLMEAVRTS GLSTISDTLD ETAYGEGKEQ 420
  421 ADREITSEME ALAAAYHVFR NVAQPFFNYI EEEDLLRFMI KEEVDLVFPL FDGAAETGRI 480
  481 TRKAFTEWVV KVYTSRRALA HSLNDTKTAV KQLNKLVTAI LMVVTVVIWL LLLEVATTKV 540
  541 LLFFSTQLVA LAFIIGSTCK NLFESIVFVF VMHPYDVGDR CVVDGVAMLV EEMNLLTTVF 600
  601 LKLNNEKVYY PNAVLATKPI SNYFRSPNMG ETVEFSISFS TPVSKIAHLK ERIAEYLEQN 660
  661 PQHWAPVHSV VVKEIENMNK LKMALYSDHT ITFQENRERN LRRTELSLAI KRMLEDLHID 720
  721 YTLLPQDINL TKKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle