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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12322201, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDIEDLLAG GVGGAPPGFR LPLNAVGINP KTNKSKRISS KPDQITASNR DSLAPPSMKI  60
   61 PGTQTIYIKT FGCSHNQSDS EYMAGQLSAF GYALTEVPEE ADLWLINTCT VKSPSQSAMS 120
  121 TLITRGRSGK KPLVIAGCVP QGSRDLKELE GVSVVGVQQI DRVVEIVEET LKGHEVRLLT 180
  181 RKTLPALDLP KVRRNNFIEI LPINVGCLGA CTYCKTKHAR GHLGSYTVDS LVERVRTVIS 240
  241 EGVKEIWLSS EDTGAYGRDI GVNLPILLNA IVKELPSDQS TMLRIGMTNP PFILEHLKEI 300
  301 AAVLRHPCVY TFLHVPVQSG SDSVLTAMNR EYTASEFRTV VDTLTELVPG MQIATDIICG 360
  361 FPGETDEDFS QTVELIKDYK FPQVHISQFY PRPGTPAAKM KKVQSKIVKQ RSRELTSVFE 420
  421 AFAPYTGMEC REERIWITEV ATDGIHLVGH TKGYVQVLVT GPESMLGTSA MARITSVGRW 480
  481 SVFGEVIETF SSANRETKSR EETKLPCSSN VSTCETCTCS AESCGEERSG EACNISGNIS 540
  541 GQDDNKGKSK KEEKEVQEVV VPGSSVANWG FIDKALVCGV FVSSVTILVL LISIACRVLL 600
  601 R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle