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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AED3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSLHFFF FLTLLLPFTF TTATRDTCAT AAPDGSDDLS IIPINAKCSP FAPTHVSASV  60
   61 IDTVLHMASS DSHRLTYLSS LVAGKPKPTS VPVASGNQLH IGNYVVRAKL GTPPQLMFMV 120
  121 LDTSNDAVWL PCSGCSGCSN ASTSFNTNSS STYSTVSCST AQCTQARGLT CPSSSPQPSV 180
  181 CSFNQSYGGD SSFSASLVQD TLTLAPDVIP NFSFGCINSA SGNSLPPQGL MGLGRGPMSL 240
  241 VSQTTSLYSG VFSYCLPSFR SFYFSGSLKL GLLGQPKSIR YTPLLRNPRR PSLYYVNLTG 300
  301 VSVGSVQVPV DPVYLTFDAN SGAGTIIDSG TVITRFAQPV YEAIRDEFRK QVNVSSFSTL 360
  361 GAFDTCFSAD NENVAPKITL HMTSLDLKLP MENTLIHSSA GTLTCLSMAG IRQNANAVLN 420
  421 VIANLQQQNL RILFDVPNSR IGIAPEPCN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle