YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|9758038, gi\|2...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP  60
   61 SSYGTRKDDS PFAQFFRSTE SNVERIIFDF RFLALLAVGG SLAGSLLCFL NGCVYIVEAY 120
  121 KVYWTNCSKG IHTGQMVLRL VEAIDVYLAG TVMLIFSMGL YGLFISHSPH DVPPESDRAL 180
  181 RSSSLFGMFA MKERPKWMKI SSLDELKTKV GHVIVMILLV KMFERSKMVT IATGLDLLSY 240
  241 SVCIFLSSAS LYILHNLHKG ET

Type	Start	End	Confidence
Cytoplasmic	1	91	0.86
Transmembrane Helix	92	115	0.87
Non-Cytoplasmic	116	142	0.83
Transmembrane Helix	143	165	0.89
Cytoplasmic	166	230	0.81
Transmembrane Helix	231	254	0.82
Non-Cytoplasmic	255	262	0.71