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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GPDA1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRSFFFSS SIFSLSHSRS PSLSSSRFSS LSAAMSPALE KSRQGNGGCN DDSKSKVTVV  60
   61 GSGNWGSVAA KLIASNALKL PSFHDEVRMW VFEEVLPNGE KLNDVINKTN ENVKYLPGIK 120
  121 LGRNVVADPD LENAVKDANM LVFVTPHQFM DGICKKLDGK ITGDVEAISL VKGMEVKKEG 180
  181 PCMISSLISK QLGINCCVLM GANIANEIAV EKFSEATVGY RGSREIADTW VQLFSTPYFM 240
  241 VTPVHDVEGV ELCGTLKNVV AIAAGFVDGL EMGNNTKAAI MRIGLREMKA LSKLLFPSVK 300
  301 DSTFFESCGV ADVITTCLGG RNRRVAEAFA KSRGKRSFDE LEAEMLQGQK LQGVSTAREV 360
  361 YEVLKHCGWL EMFPLFSTVH QICTGRLQPE AIVQYRENKL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle