YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NAI2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKFLALGL SLCLVLSSFY QVSCQDEGTG SLSTLDLIEH EYQTSVNSLQ GNEAVDQTET  60
   61 SGQKNSTVSD NNTISLSLSE EPALETLKES VDTSAELGAV TDEVDKPSSM LDHIELEFEA 120
  121 HINELKEAGS DGINKVEESK DDEEAARRHK MLEAIEREFE AAHAGFEQLK TDDSAQGLDD 180
  181 EQSAKRQSML DEIERDFEAA TKGLEQLKAD DLTGINDEEH AAKRQKMLEE IEREFEEATK 240
  241 GLEELRHSTS STDDEAQSAK RQNMLDEIER EFEAATSGLK ELKINAHTVK DDVDDKEQDA 300
  301 KRQSMLDAIE REFEAVTESF KQLEDIADNK AEGDDESAKR QSMLDEIERE FEAATNSLKQ 360
  361 LNLDDFSEGD DSAESARRNS MLEAIEREFE AATKGLEELK ANDSTGDKDD DEHVARRKIM 420
  421 LEAIEREFEA ATKGLEELKN ESEQAENKRN SMLEAFEREF EAATNAKANG ENSAKNPSTI 480
  481 STTVQKSSGG YNAGLEGLLK PADGVCGCFN KDKDGLQADT DSSINIAEIL AEESKLQGSG 540
  541 TSRLTTSLNN LVDTHRKETS SKVGSVLGSS SSVTSTTSES AATSESIESL KQTLRKLRGL 600
  601 SARDLVNHPN FDAIIAAGTR YEVLSSASIG YISLLAKYKT VIKEGLEASQ RVQIAQTRAK 660
  661 LLKETAMEKQ RTVDSVFAAA KTTAQRGDAL HIRIVAIKKL LAKLEAEKVD VDSKFTSLTT 720
  721 SLSELLKEAS QAYEEYHEAV HKAKDEQAAE EFAVETTKRA EHIWVEFLSS LN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle