YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 6GPD3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVQPTRIGL AGLAVMGQNL ALNIAEKGFP ISVYNRTTSK VDETVERAKK EGNLPLYGFH  60
   61 DPESFVKSIQ KPRVIIMLVK AGSPVDQTIK TLSAYLEKGD CIVDGGNEWY ENTERREKAV 120
  121 AENGFLYLGM GVSGGEEGAR NGPSMMPGGS YEAYKNIEDI VLKVAAQVRD SGPCVTYIGK 180
  181 GGSGNFVKMV HNGIEYGDMQ LIAEAYDVLK SVGKLSNEEL HSVFSDWNKG ELESFLVEIT 240
  241 ADIFGIKDDK GDGHLVDKVL DKTGMKGTGK WTVQQAAELS VPAPTIESSL DARFLSGLKD 300
  301 ERVQAAKVFK AGGFGDILTD QKVDKKQLVD DVRKALYASK ICSYAQGMNL IRAKSIEKGW 360
  361 GLKLGELARI WKGGCIIRAI FLDRIKQAYD RNAELANLLV DPEFAKEIIE RQSAWRRVVC 420
  421 LAINSGISTP GMSASLAYFD SYRRERLPAN LVQAQRDYFG AHTYERTDVE GSFHTEWFKI 480
  481 ARQSKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle