YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SSL8_ARATH
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISRRVLTP ITAAPVILAV LCFFFWSSII GPDNLKGTKH VLQDAKTIPL PVDGPESLEF  60
   61 DPQGEGPYVG VTDGRILKWR GEELGWVDFA YTSPHRDNCS SHEVVPSCGR PLGLSFERKT 120
  121 GDLYICDGYF GVMKVGPEGG LAELVVDEAE GRKVMFANQG DIDEEEDIFY FNDSSDTYHF 180
  181 RDVFYVSLSG TKVGRVIRYD MKKKEAKVIM DKLRLPNGLA LSKNGSFVVT CESSTNICHR 240
  241 IWVKGPKSGT NEVFATLPGS PDNIRRTPTG DFWVALHCKK NLFTRAVLIH TWVGRFFMNT 300
  301 MKMETVIHFM NGGKPHGIVV KLSGETGEIL EILEDSEGKT VKYVSEAYET KDGKLWIGSV 360
  361 YWPAVWVLDT SVYDSI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle