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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: INVA4_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA  60
   61 LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK LSGDRNTPAF EWNNSMLSWQ 120
  121 RTAFHFQPEQ NWMNDPNGPL FYKGWYHFFY QYNPNAAVWG DIVWGHAVSR DLIHWVHLPI 180
  181 AMVADQWYDS NGVWTGSATF LPDGSIVMLY TGSTDKAVQV QNLAYPEDPN DPLLLKWVKF 240
  241 PGNPVLVPPP GILPKDFRDP TTAWKTSEGK WRITIGSKLN KTGISLVYDT IDFKTYEKLD 300
  301 TLLHRVPNTG MWECVDFYPV SKTAGNGLDT SVNGPDVKHI VKASMDDTRF DHYAVGTYFD 360
  361 SNGTWIPDDP TIDVGMTASL RYDYGKFYAS KSFYDQNKGR RVLWSWIGES DSEASDVQKG 420
  421 WSSLQGIPRT VVLDTKTGKN LVQWPVEEIK SLRLSSKQFD LEVGPGSVVP VDVGSAAQLD 480
  481 IEAEFEINKE SLDKIIGNAS VVAEAEEFSC EKSGGSTVRG ALGPFGFSVL ATESLSEQTP 540
  541 VYFYVAKGKD SELKTFFCTD TSRSSVANDV VKPIYGSVVP VLKGEKLTMR ILVDHSIVEA 600
  601 FGQGGRTCIT SRVYPTTAIY GAAKLFLFNN ALDATVTASF TVWQMNSAFI HPYSDEAVRA 660
  661 LSRT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle