YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MSBP1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALELWQTLK EAIHAYTGLS PVVFFTALAL AFAIYQVISG WFASPFDDVN RHQRARSLAQ  60
   61 EEEPPIPQPV QVGEITEEEL KQYDGSDPQK PLLMAIKHQI YDVTQSRMFY GPGGPYALFA 120
  121 GKDASRALAK MSFEEKDLTW DVSGLGPFEL DALQDWEYKF MSKYAKVGTV KVAGSEPETA 180
  181 SVSEPTENVE QDAHVTTTPG KTVVDKSDDA PAETVLKKEE

Type	Start	End	Confidence
Cytoplasmic	1	12	0.81
Transmembrane Helix	13	35	0.84
Non-Cytoplasmic	36	220	0.83