YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20197164, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTMALSS PALTGKAVKL SPAASEVFGT GRITMRKASK PTGPSGSPWY GSDRVKYLGP  60
   61 FSGEPPSYLT GEFPGDYGWD TAGLSADPET FARNRELEVI HSRWAMLGAL GCVFPELLAR 120
  121 NGVKFGEAVW FKAGSQIFSD GGLDYLGNPS LVHAQSILAI WATQVILMGA VEGYRVAGDG 180
  181 PLGEAEDLLY PGGSFDPLGL ATDPEAFAEL KVKELKNGRL AMFSMFGFFV QAIVTGKGPL 240
  241 ENLADHLADP VNNNAWAFAT NFVPGK

Type	Start	End	Confidence
Signal Peptide	1	17	0.48
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	266	0.73