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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GDPD5_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILTRCLPLI WLSLLTVCAA GRTLHPLPVK GPKTVKLQLQ TSRPYNIAHR GSNGEIPEET  60
   61 TAAYLKAIEE GTDFIETDIL SSKDGVLICF HDCILDETTN VASHKEFADR KRTYDVQGFN 120
  121 ITGFFTFDFT LKELKQLRIK QRYAFRDQQY NGMYPIITFE EFLTIARDAP RVVGIYPEIK 180
  181 NPVLMNQHVK WPGGKKFEDK VVETLKKYGY GGSYLSKKWL KKPLFIQSFA PTSLVYISNL 240
  241 TDSPKVLLID DVTMPTQDTN QTYAEITSDA YFEYIKQYVV GIGPWKDTIV PVNNNYVLAP 300
  301 TDLVKRAHAH NLQVHPYTYR NEHEFLHYNF SQDPYKEYDY WINEIGVDGL FTDFTGSLHN 360
  361 FQEWTSPLPD TSKSPRQLLS QIASLVLPYA KA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle