YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51970204, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALSISLAF SVDSLKPTQS TKFGFSSSSH RYPLLYSCKS HRSNLRFAFP PSSVSTATET  60
   61 GEENSKSTGN YAFLEESFRT GRFLSNDELE KLKTLEGFAY FQELESGSMW VRVMRHEEMD 120
  121 STVHLLAESF GESMLLPSGY QSVLRFLIKQ YLIERREVLP HAVTLVGFFR KKVDEFSDDG 180
  181 EEEAVMAGTV EVCLEKRGAN ASPPSPTPPK ESPYICNMTV KEDLRRRGIG WHLLKASEEL 240
  241 ISQISPSKDV YLHCRMVDEA PFNMYKKAGY EVVKTDTVLV LLMLQRRKHL MRKKLLPLCT 300
  301 NPIVEMVGSD NELTSSANV

Type	Start	End	Confidence
Signal Peptide	1	14	0.54
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	319	0.99