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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LEU12_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSILKSPN LSSPSFGVPS IPALSSSSTS PFSSLHLRSQ NHRTISLTTA GKFRVSYSLS  60
   61 ASSPLPPHAP RRRPNYIPNR ISDPNYVRIF DTTLRDGEQS PGATLTSKEK LDIARQLAKL 120
  121 GVDIIEAGFP AASKDDFEAV KTIAETVGNT VDENGYVPVI CGLSRCNKKD IETAWEAVKY 180
  181 AKRPRIHTFI ATSDIHLKYK LKKSKEEVIE IARNMVRFAR SLGCEDVEFS PEDAGRSERE 240
  241 YLYEILGEVI KAGATTLNIP DTVGITLPSE FGQLIADIKA NTPGIQNVII STHCQNDLGL 300
  301 STANTLSGAH SGARQVEVTI NGIGERAGNA SLEEVVMAIK CRGDHVLGGL FTGIDTRHIV 360
  361 MTSKMVEEYT GMQTQPHKAI VGANAFAHES GIHQDGMLKH KGTYEIMSPE EIGLERSNDA 420
  421 GIVLGKLSGR HALKDRLNEL GYVLDDGQLS NLFWRFKAVA EQKKRVTDAD LIALVSDEVF 480
  481 QPEAVWKLLD MQITCGTLGL STSTVKLADS DGKEHVACSV GTGPVDAAYK AVDLIVKEPA 540
  541 TLLEYSMNAV TEGIDAIATT RVLIRGDNNY SSTNAVTGES VERTFSGTGA GMDIVVSSVK 600
  601 AYVGALNKML GFKEHTSTLS KTPLETNEVP A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle