YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GATL6_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWITRFAGL FSAAMAVIVL SPSLQSFPPA AAIRSSPSPI FRKAPAVFNN GDECLSSGGV  60
   61 CNPSLVHVAI TLDVEYLRGS IAAVNSILQH SVCPESVFFH FIAVSEETNL LESLVRSVFP 120
  121 RLKFNIYDFA PETVRGLISS SVRQALEQPL NYARSYLADL LEPCVNRVIY LDSDLVVVDD 180
  181 IAKLWKTSLG SRIIGAPEYC HANFTKYFTG GFWSEERFSG TFRGRKPCYF NTGVMVIDLK 240
  241 KWRRGGYTKR IEKWMEIQRR ERIYELGSLP PFLLVFSGHV APISHRWNQH GLGGDNVRGS 300
  301 CRDLHPGPVS LLHWSGSGKP WIRLDSKRPC PLDALWTPYD LYRHSH

Type	Start	End	Confidence
Signal Peptide	1	26	0.98
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	346	0.98