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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSMKEIFS KDNFKKNKKL VLLSAAVALL FVAAVAGISA GASKANEKRT LSPSSHAVLR  60
   61 SSCSSTRYPE LCISAVVTAG GVELTSQKDV IEASVNLTIT AVEHNYFTVK KLIKKRKGLT 120
  121 PREKTALHDC LETIDETLDE LHETVEDLHL YPTKKTLREH AGDLKTLISS AITNQETCLD 180
  181 GFSHDDADKQ VRKALLKGQI HVEHMCSNAL AMIKNMTDTD IANFEQKAKI TSNNRKLKEE 240
  241 NQETTVAVDI AGAGELDSEG WPTWLSAGDR RLLQGSGVKA DATVAADGSG TFKTVAAAVA 300
  301 AAPENSNKRY VIHIKAGVYR ENVEVAKKKK NIMFMGDGRT RTIITGSRNV VDGSTTFHSA 360
  361 TVAAVGERFL ARDITFQNTA GPSKHQAVAL RVGSDFSAFY NCDMLAYQDT LYVHSNRQFF 420
  421 VKCLIAGTVD FIFGNAAVVL QDCDIHARRP NSGQKNMVTA QGRTDPNQNT GIVIQKCRIG 480
  481 ATSDLQSVKG SFPTYLGRPW KEYSQTVIMQ SAISDVIRPE GWSEWTGTFA LNTLTYREYS 540
  541 NTGAGAGTAN RVKWRGFKVI TAAAEAQKYT AGQFIGGGGW LSSTGFPFSL GL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle