YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	G3PP1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSSLLRSA ASYTVAAPRP DFFSSPASDH SKVLSSLGFS RNLKPSRFSS GISSSLQNGN  60
   61 ARSVQPIKAT ATEVPSAVRR SSSSGKTKVG INGFGRIGRL VLRIATSRDD IEVVAVNDPF 120
  121 IDAKYMAYML KYDSTHGNFK GSINVIDDST LEINGKKVNV VSKRDPSEIP WADLGADYVV 180
  181 ESSGVFTTLS KAASHLKGGA KKVIISAPSA DAPMFVVGVN EHTYQPNMDI VSNASCTTNC 240
  241 LAPLAKVVHE EFGILEGLMT TVHATTATQK TVDGPSMKDW RGGRGASQNI IPSSTGAAKA 300
  301 VGKVLPELNG KLTGMAFRVP TSNVSVVDLT CRLEKGASYE DVKAAIKHAS EGPLKGILGY 360
  361 TDEDVVSNDF VGDSRSSIFD ANAGIGLSKS FVKLVSWYDN EWGYSNRVLD LIEHMALVAA 420
  421 SH

Type	Start	End	Confidence
Signal Peptide	1	16	0.52
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	422	0.99