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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XYL1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSLAF SLSLLLALIL CFSPTQSYKT IGKGYRLVSI EESPDGGFIG YLQVKQKNKI  60
   61 YGSDITTLRL FVKHETDSRL RVHITDAKQQ RWEVPYNLLP REQPPQVGKV IGKSRKSPIT 120
  121 VQEISGSELI FSYTTDPFTF AVKRRSNHET LFNTTSSLVF KDQYLEISTS LPKEASLYGL 180
  181 GENSQANGIK LVPNEPYTLY TEDVSAINLN TDLYGSHPMY MDLRNVGGKA YAHAVLLLNS 240
  241 NGMDVFYRGD SLTYKVIGGV FDFYFIAGPS PLNVVDQYTQ LIGRPAPMPY WSLGFHQCRW 300
  301 GYHNLSVVED VVDNYKKAKI PLDVIWNDDD HMDGHKDFTL NPVAYPRAKL LAFLDKIHKI 360
  361 GMKYIVINDP GIGVNASYGT FQRAMAADVF IKYEGKPFLA QVWPGPVYFP DFLNPKTVSW 420
  421 WGDEIKRFHD LVPIDGLWID MNEVSNFCSG LCTIPEGKQC PSGEGPGWVC CLDCKNITKT 480
  481 RWDDPPYKIN ATGVVAPVGF KTIATSATHY NGVREYDAHS IYGFSETIAT HKGLLNVQGK 540
  541 RPFILSRSTF VGSGQYAAHW TGDNQGTWQS LQVSISTMLN FGIFGVPMVG SDICGFYPQP 600
  601 TEELCNRWIE VGAFYPFSRD HANYYSPRQE LYQWDTVADS ARNALGMRYK ILPFLYTLNY 660
  661 EAHMTGAPIA RPLFFSFPEY TECYGNSRQF LLGSSFMISP VLEQGKTEVE ALFPPGSWYH 720
  721 MFDMTQAVVS KNGKRVTLPA PLNFVNVHLY QNTILPTQQG GLISKDARTT PFSLVIAFPA 780
  781 GASEGYATGK LYLDEDELPE MKLGNGQSTY VDFYASVGNG TMKMWSQVKE GKFALSKGWV 840
  841 IEKVSVLGLR GAGQVSEIQI NGSPMTKKIE VSSKEHTYVI GLEDEEENKS VMVEVRGLEM 900
  901 LVGKDFNMSW KMGIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle