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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PME35_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTSFSLPN HKFGIKLMLF LVLNLLSLQT SVFAHSSNSK FTKISRHPNS DSSSRTKPST  60
   61 SSNKGFLSSV QLSLDHALFA RSLAFNLTLS HRTSQTLMLD PVNDCLELLD DTLDMLYRIV 120
  121 VIKRKDHVND DVHTWLSAAL TNQETCKQSL SEKSSFNKEG IAIDSFARNL TGLLTNSLDM 180
  181 FVSDKQKSSS SSNLTGGRKL LSDHDFPTWV SSSDRKLLEA SVEELRPHAV VAADGSGTHM 240
  241 SVAEALASLE KGSGRSVIHL TAGTYKENLN IPSKQKNVML VGDGKGKTVI VGSRSNRGGW 300
  301 NTYQSATVAA MGDGFIARDI TFVNSAGPNS EQAVALRVGS DRSVVYRCSI DGYQDSLYTL 360
  361 SKRQFYRETD ITGTVDFIFG NSAVVFQSCN LVSRKGSSDQ NYVTAQGRSD PNQNTGISIH 420
  421 NCRITGSTKT YLGRPWKQYS RTVVMQSFID GSIHPSGWSP WSSNFALKTL YYGEFGNSGP 480
  481 GSSVSGRVSW AGYHPALTLT EAQGFTVSGF IDGNSWLPST GVVFDSGLL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle