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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MAP1B_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVFLSSF SSSSSLQLCS SFHGEYLAPS RCFLGAPVTS SSLSLSGKKN SYSPRQFHVS  60
   61 AKKVSGLEEA IRIRKMRELE TKSKVRRNPP LRRGRVSPRL LVPDHIPRPP YVESGVLPDI 120
  121 SSEFQIPGPE GIAKMRAACE LAARVLNYAG TLVKPSVTTN EIDKAVHDMI IEAGAYPSPL 180
  181 GYGGFPKSVC TSVNECMCHG IPDSRQLQSG DIINIDVTVY LDGYHGDTSR TFFCGEVDEG 240
  241 FKRLVKVTEE CLERGIAVCK DGASFKKIGK RISEHAEKFG YNVVERFVGH GVGPVFHSEP 300
  301 LIYHYRNDEP GLMVEGQTFT IEPILTIGTT ECVTWPDNWT TLTADGGVAA QFEHTILITR 360
  361 TGSEILTKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle